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Bayesian Analysis with Python

You're reading from   Bayesian Analysis with Python Introduction to statistical modeling and probabilistic programming using PyMC3 and ArviZ

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Product type Paperback
Published in Dec 2018
Publisher Packt
ISBN-13 9781789341652
Length 356 pages
Edition 2nd Edition
Languages
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Author (1):
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Osvaldo Martin Osvaldo Martin
Author Profile Icon Osvaldo Martin
Osvaldo Martin
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Table of Contents (11) Chapters Close

Preface 1. Thinking Probabilistically 2. Programming Probabilistically FREE CHAPTER 3. Modeling with Linear Regression 4. Generalizing Linear Models 5. Model Comparison 6. Mixture Models 7. Gaussian Processes 8. Inference Engines 9. Where To Go Next?
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Hierarchical linear regression

In the previous chapter, we learned about the rudiments of hierarchical models. We can apply this concept to linear regression as well. This allows models to deal with inferences at the group level and estimations above the group level. As we already saw, this is done by including hyperpriors.

We are going to create eight related data groups, including one group with a single data point:

N = 20
M = 8
idx = np.repeat(range(M-1), N)
idx = np.append(idx, 7)
np.random.seed(314)

alpha_real = np.random.normal(2.5, 0.5, size=M)
beta_real = np.random.beta(6, 1, size=M)
eps_real = np.random.normal(0, 0.5, size=len(idx))

y_m = np.zeros(len(idx))
x_m = np.random.normal(10, 1, len(idx))
y_m = alpha_real[idx] + beta_real[idx] * x_m + eps_real

_, ax = plt.subplots(2, 4, figsize=(10, 5), sharex=True, sharey=True)
ax = np.ravel(ax)
j, k = 0, N
for i in range(M):
ax[i].scatter...
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