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Python Data Analysis

You're reading from   Python Data Analysis Learn how to apply powerful data analysis techniques with popular open source Python modules

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Product type Paperback
Published in Oct 2014
Publisher
ISBN-13 9781783553358
Length 348 pages
Edition 1st Edition
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Author (1):
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Ivan Idris Ivan Idris
Author Profile Icon Ivan Idris
Ivan Idris
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Toc

Table of Contents (17) Chapters Close

Preface 1. Getting Started with Python Libraries FREE CHAPTER 2. NumPy Arrays 3. Statistics and Linear Algebra 4. pandas Primer 5. Retrieving, Processing, and Storing Data 6. Data Visualization 7. Signal Processing and Time Series 8. Working with Databases 9. Analyzing Textual Data and Social Media 10. Predictive Analytics and Machine Learning 11. Environments Outside the Python Ecosystem and Cloud Computing 12. Performance Tuning, Profiling, and Concurrency A. Key Concepts
B. Useful Functions C. Online Resources
Index

Reading and writing pandas DataFrames to HDF5 stores


The HDFStore class is the pandas abstraction responsible for dealing with HDF5 data. Using random data and temporary files, we will demonstrate this functionality. These are the steps to do so:

Give the HDFStore constructor the path to a temporary file and create a store:

store = pd.io.pytables.HDFStore(tmpf.name)
print store

The preceding code snippet will print the file path to the store and its contents, which is empty at the moment:

<class 'pandas.io.pytables.HDFStore'>
File path: /var/folders/k_/xx_xz6xj0hx627654s3vld440000gn/T/tmpfmwPPB
Empty

HDFStore has a dict-like interface, meaning that we can store values, for instance, a pandas DataFrame with a corresponding lookup key. Store a DataFrame containing random data in HDFStore as follows:

store['df'] = df
print store

Now the store contains data as illustrated in the following output:

<class 'pandas.io.pytables.HDFStore'>
File path: /var/folders/k_/xx_xz6xj0hx627654s3vld440000gn...
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