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Jupyter for Data Science

You're reading from   Jupyter for Data Science Exploratory analysis, statistical modeling, machine learning, and data visualization with Jupyter

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Product type Paperback
Published in Oct 2017
Publisher Packt
ISBN-13 9781785880070
Length 242 pages
Edition 1st Edition
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Author (1):
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Dan Toomey Dan Toomey
Author Profile Icon Dan Toomey
Dan Toomey
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Table of Contents (11) Chapters Close

Preface 1. Jupyter and Data Science FREE CHAPTER 2. Working with Analytical Data on Jupyter 3. Data Visualization and Prediction 4. Data Mining and SQL Queries 5. R with Jupyter 6. Data Wrangling 7. Jupyter Dashboards 8. Statistical Modeling 9. Machine Learning Using Jupyter 10. Optimizing Jupyter Notebooks

Tidying up data with tidyr


The tidyr package is available to clean up/tidy your dataset. The use of tidyr is to rearrange your data so that:

  • Each column is a variable
  • Each row is an observation

When your data is arranged in this manner, it becomes much easier to analyze. There are many datasets published that mix columns and rows with values. You then must adjust them accordingly if you use the data in situ.

tidyr provides three functions for cleaning up your data:

  • gather
  • separate
  • spread

The gather() function takes your data and arranges the data into key-value pairs, much like the Hadoop database model. Let's use the standard example of stock prices for a date using the following:

library(tidyr)
stocks <- data_frame(
  time = as.Date('2017-08-05') + 0:9,
  X = rnorm(10, 20, 1), #how many numbers, mean, std dev
  Y = rnorm(10, 20, 2),
  Z = rnorm(10, 20, 4)
)

This will generate data that looks like this:

Every row has a timestamp and the prices of the three stocks at that time.

We first use gather...

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