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Image Processing with ImageJ - Second Edition

You're reading from   Image Processing with ImageJ - Second Edition Extract and analyze data from complex images with ImageJ, the world's leading image processing tool

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Product type Paperback
Published in Nov 2015
Publisher
ISBN-13 9781785889837
Length 256 pages
Edition 1st Edition
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Table of Contents (12) Chapters Close

Preface 1. Getting Started with ImageJ FREE CHAPTER 2. Basic Image Processing with ImageJ 3. Advanced Image Processing with ImageJ 4. Image Segmentation and Feature Extraction with ImageJ 5. Basic Measurements with ImageJ 6. Developing Macros in ImageJ 7. Explanation of ImageJ Constructs 8. Anatomy of ImageJ Plugins 9. Creating ImageJ Plugins for Analysis 10. Where to Go from Here? Index

Colocalization


In the previous sections, we looked at ways to measure certain aspects of our images, such as velocity and length. This section will look at a different aspect of measurements that involve the colocalization of different signals. Colocalization means that two (or more) objects are within proximity of each other. Whenever two signals overlap in space, we can conclude that they are at the same location, within the boundaries of the resolution that an imaging system allows us. In biology, the localization of two labeled structures or proteins provides clues to whether the protein is contained within a structure or whether it moves to a certain location after being stimulated. For dynamic structures such as cells, we can observe a change in the amount of colocalization, depending on time or stimulation.

Semiquantitative colocalization

Semiquantitative colocalization means that you examine the amount of colocalization by eye or using a crude measurement and classify it (rather arbitrarily...

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