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Bayesian Analysis with Python

You're reading from   Bayesian Analysis with Python A practical guide to probabilistic modeling

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Product type Paperback
Published in Jan 2024
Publisher Packt
ISBN-13 9781805127161
Length 394 pages
Edition 3rd Edition
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Author (1):
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Osvaldo Martin Osvaldo Martin
Author Profile Icon Osvaldo Martin
Osvaldo Martin
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Table of Contents (15) Chapters Close

Preface
1. Chapter 1 Thinking Probabilistically FREE CHAPTER 2. Chapter 2 Programming Probabilistically 3. Chapter 3 Hierarchical Models 4. Chapter 4 Modeling with Lines 5. Chapter 5 Comparing Models 6. Chapter 6 Modeling with Bambi 7. Chapter 7 Mixture Models 8. Chapter 8 Gaussian Processes 9. Chapter 9 Bayesian Additive Regression Trees 10. Chapter 10 Inference Engines 11. Chapter 11 Where to Go Next 12. Bibliography
13. Other Books You May Enjoy
14. Index

7.4 How to choose K

One of the main concerns with finite mixture models is how to decide on the number of components. A rule of thumb is to begin with a relatively small number of components and then increase it to improve the model-fit evaluation. As we already know from Chapter 5, model fit can be evaluated using posterior-predictive checks, metrics such as the ELPD, and the expertise of the modeler(s).

Let us compare the model for K = {2,3,4,5}. To do this, we are going to fit the model four times and then save the data and model objects for later use:

Code 7.4

Ks = [2, 3, 4, 5] 
 
models = [] 
idatas = [] 
for k in Ks: 
    with pm.Model() as model: 
        p = pm.Dirichlet('p', a=np.ones(k)) 
        means = pm.Normal('means', 
               ...
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