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Matplotlib for Python Developers

You're reading from   Matplotlib for Python Developers Effective techniques for data visualization with Python

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Product type Paperback
Published in Apr 2018
Publisher Packt
ISBN-13 9781788625173
Length 300 pages
Edition 2nd Edition
Languages
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Authors (3):
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Claire Chung Claire Chung
Author Profile Icon Claire Chung
Claire Chung
Aldrin Yim Aldrin Yim
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Aldrin Yim
Allen Yu Allen Yu
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Allen Yu
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Table of Contents (11) Chapters Close

Preface 1. Introduction to Matplotlib 2. Getting Started with Matplotlib FREE CHAPTER 3. Decorating Graphs with Plot Styles and Types 4. Advanced Matplotlib 5. Embedding Matplotlib in GTK+3 6. Embedding Matplotlib in Qt 5 7. Embedding Matplotlib in wxWidgets Using wxPython 8. Integrating Matplotlib with Web Applications 9. Matplotlib in the Real World 10. Integrating Data Visualization into the Workflow

Exploring the data nature by the t-SNE method


After visualizing a few images and glimpsing of how the samples are distributed, we will go deeper into our EDA.

Each pixel comes with an intensity value, which makes 64 variables for each 8x8 image. The human brain is not good at intuitively perceiving dimensions higher than three. For high-dimensional data, we need more effective visual aids. 

Dimensionality reduction methods, such as the commonly used PCA and t-SNE, reduce the number of input variables under consideration, while retaining most of the useful information. As a result, the visualization of data becomes more intuitive.

In the following section, we will focus our discussion on the t-SNE method by using the scikit-learn library in Python.

Understanding t-Distributed stochastic neighbor embedding 

The t-SNE method was proposed by van der Maaten and Hinton in 2008 in the publication Visualizing Data using t-SNE. It is a nonlinear dimension reduction method that aims to effectively visualize...

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