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R Statistics Cookbook

You're reading from   R Statistics Cookbook Over 100 recipes for performing complex statistical operations with R 3.5

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Product type Paperback
Published in Mar 2019
Publisher Packt
ISBN-13 9781789802566
Length 448 pages
Edition 1st Edition
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Author (1):
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Francisco Juretig Francisco Juretig
Author Profile Icon Francisco Juretig
Francisco Juretig
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Table of Contents (12) Chapters Close

Preface 1. Getting Started with R and Statistics FREE CHAPTER 2. Univariate and Multivariate Tests for Equality of Means 3. Linear Regression 4. Bayesian Regression 5. Nonparametric Methods 6. Robust Methods 7. Time Series Analysis 8. Mixed Effects Models 9. Predictive Models Using the Caret Package 10. Bayesian Networks and Hidden Markov Models 11. Other Books You May Enjoy

Robust Gaussian mixture models with the qclust package

Clustering is usually done via the k-means algorithm. It works by assigning each observation to the closest centroid (vector of means for each group), then recalculating the centroid, and then iterating across all observations. The algorithm stops when no observation changes from cluster. But k-means has a major flaw. Because each observation is assigned to the closest centroid, we are implicitly assuming that the clusters are spherical (no correlation between the variables). In many cases this is not a realistic assumption.

A different approach is to assume that each observation comes from one out of three possible distributions. These distributions are assumed to be multivariate Gaussian, with possibly different covariance matrices. Of course, since the algorithm relies on estimating covariance matrices using standard techniques...

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