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Simulation for Data Science with R

You're reading from   Simulation for Data Science with R Effective Data-driven Decision Making

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Product type Paperback
Published in Jun 2016
Publisher Packt
ISBN-13 9781785881169
Length 398 pages
Edition 1st Edition
Languages
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Author (1):
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Matthias Templ Matthias Templ
Author Profile Icon Matthias Templ
Matthias Templ
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Table of Contents (13) Chapters Close

Preface 1. Introduction 2. R and High-Performance Computing FREE CHAPTER 3. The Discrepancy between Pencil-Driven Theory and Data-Driven Computational Solutions 4. Simulation of Random Numbers 5. Monte Carlo Methods for Optimization Problems 6. Probability Theory Shown by Simulation 7. Resampling Methods 8. Applications of Resampling Methods and Monte Carlo Tests 9. The EM Algorithm 10. Simulation with Complex Data 11. System Dynamics and Agent-Based Models Index

The EM algorithm by example of k-means clustering


Probably the most famous algorithm for clustering observations to groups is the k-means algorithm. We will see that this algorithm is just a variant of the EM algorithm.

Given n objects, characterized by p variables, we like to partition them into clusters such that cluster has members and each observation is in one cluster. The mean vector (center, prototype), Vk, of a cluster is defined as the centroid of the cluster and the components of the mean vector can be calculated by where is the number of observations in cluster and is the i-th observation belonging to cluster . For each cluster the corresponding cluster means are calculated.

We also need to determine the number of clusters in the output partition. Starting from the given initial locations of the cluster centroids, the algorithm uses the data points to iteratively relocate the centroids and reallocate points to the closest centroid. The process is composed of these steps...

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