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Deep Learning for Genomics

You're reading from   Deep Learning for Genomics Data-driven approaches for genomics applications in life sciences and biotechnology

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Product type Paperback
Published in Nov 2022
Publisher Packt
ISBN-13 9781804615447
Length 270 pages
Edition 1st Edition
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Author (1):
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Upendra Kumar Devisetty Upendra Kumar Devisetty
Author Profile Icon Upendra Kumar Devisetty
Upendra Kumar Devisetty
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Table of Contents (18) Chapters Close

Preface 1. Part 1 – Machine Learning in Genomics
2. Chapter 1: Introducing Machine Learning for Genomics FREE CHAPTER 3. Chapter 2: Genomics Data Analysis 4. Chapter 3: Machine Learning Methods for Genomic Applications 5. Part 2 – Deep Learning for Genomic Applications
6. Chapter 4: Deep Learning for Genomics 7. Chapter 5: Introducing Convolutional Neural Networks for Genomics 8. Chapter 6: Recurrent Neural Networks in Genomics 9. Chapter 7: Unsupervised Deep Learning with Autoencoders 10. Chapter 8: GANs for Improving Models in Genomics 11. Part 3 – Operationalizing models
12. Chapter 9: Building and Tuning Deep Learning Models 13. Chapter 10: Model Interpretability in Genomics 14. Chapter 11: Model Deployment and Monitoring 15. Chapter 12: Challenges, Pitfalls, and Best Practices for Deep Learning in Genomics 16. Index 17. Other Books You May Enjoy

Understanding what deep learning is and how it works

In the past few years, ML has been the go-to tool for academic research and industries since ML made it possible to learn complicated functions and patterns from highly complex data without human intervention. As early as 1980, theoretical results such as Universal Approximation Theorem seemed to indicate that it may be possible for a neural network to learn any function that existed in a dataset. This is a powerful approach because there are several problems in the real world that traditional methods cannot solve. This led to the birth of DL. Even though DL has been around for about a decade now, it has gotten mainstream attention recently. So, why didn’t DL take off until recently? This can be mainly attributed to the lack of DL frameworks, big data, and efficient hardware to build complex DL models until recently. It’s only been possible to use DL to produce meaningful empirical results due to the introduction of...

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