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Mastering Machine Learning with R

You're reading from   Mastering Machine Learning with R Master machine learning techniques with R to deliver insights for complex projects

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Product type Paperback
Published in Oct 2015
Publisher
ISBN-13 9781783984527
Length 400 pages
Edition 1st Edition
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Author (1):
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Cory Lesmeister Cory Lesmeister
Author Profile Icon Cory Lesmeister
Cory Lesmeister
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Table of Contents (15) Chapters Close

Preface 1. A Process for Success 2. Linear Regression – The Blocking and Tackling of Machine Learning FREE CHAPTER 3. Logistic Regression and Discriminant Analysis 4. Advanced Feature Selection in Linear Models 5. More Classification Techniques – K-Nearest Neighbors and Support Vector Machines 6. Classification and Regression Trees 7. Neural Networks 8. Cluster Analysis 9. Principal Components Analysis 10. Market Basket Analysis and Recommendation Engines 11. Time Series and Causality 12. Text Mining A. R Fundamentals Index

Hierarchical clustering


The hierarchical clustering algorithm is based on a dissimilarity measure between observations. A common measure, and what we will use, is Euclidean distance, but other distance measures are available.

Hierarchical clustering is an agglomerative or bottom-up technique. By this, we mean that all observations are their own cluster. From there, the algorithm proceeds iteratively by searching all the pairwise points and finding the two clusters that are the most similar. So, after the first iteration, there are n-1 clusters and after the second iteration, there are n-2 clusters, and so forth.

As the iterations continue, it is important to understand that in addition to the distance measure, we need to specify the linkage between the groups of observations. Different types of datasets will demand that you use different cluster linkages. As you experiment with the linkages, you may find that some may create highly unbalanced numbers of observations in one or more clusters...

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