Finding enriched KEGG pathways
Kyoto Encyclopedia of Genes and Genomes (KEGG) is a bioinformatics resource that integrates genomic, chemical, and systemic functional information. KEGG contains a comprehensive database of molecular networks that represent various biological systems, such as metabolic pathways, regulatory pathways, and signaling pathways.
KEGG is widely used in bioinformatics analysis to understand the relationships between genes, proteins, and other biomolecules in biological systems. It provides a wealth of information on the molecular mechanisms of various biological processes, such as metabolism, signal transduction, and disease pathways. Researchers can use KEGG to analyze their own datasets, such as gene expression data or protein-protein interaction data, and identify the key pathways that are affected by their experiments.
In this recipe, we’ll look at how to examine a gene list derived from experiments in order to find pathways using the free-to...
