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IPython Interactive Computing and Visualization Cookbook

You're reading from   IPython Interactive Computing and Visualization Cookbook Harness IPython for powerful scientific computing and Python data visualization with this collection of more than 100 practical data science recipes

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Product type Paperback
Published in Sep 2014
Publisher
ISBN-13 9781783284818
Length 512 pages
Edition 1st Edition
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Author (1):
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Cyrille Rossant Cyrille Rossant
Author Profile Icon Cyrille Rossant
Cyrille Rossant
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Table of Contents (17) Chapters Close

Preface 1. A Tour of Interactive Computing with IPython FREE CHAPTER 2. Best Practices in Interactive Computing 3. Mastering the Notebook 4. Profiling and Optimization 5. High-performance Computing 6. Advanced Visualization 7. Statistical Data Analysis 8. Machine Learning 9. Numerical Optimization 10. Signal Processing 11. Image and Audio Processing 12. Deterministic Dynamical Systems 13. Stochastic Dynamical Systems 14. Graphs, Geometry, and Geographic Information Systems 15. Symbolic and Numerical Mathematics Index

Profiling your code easily with cProfile and IPython

The %timeit magic command is often helpful, yet a bit limited when you need detailed information about what takes most of the execution time in your code. This magic command is meant for benchmarking (comparing the execution times of different versions of a function) rather than profiling (getting a detailed report of the execution time, function by function).

Python includes a profiler named cProfile that breaks down the execution time into the contributions of all called functions. IPython provides convenient ways to leverage this tool in an interactive session.

How to do it...

IPython offers the %prun line magic and the %%prun cell magic to easily profile one or multiple lines of code. The %run magic command also accepts a -p flag to run a Python script under the control of the profiler. These commands accept a lot of options, and you may want to take a look at their documentation with %prun? and %run?.

In this example, we will profile...

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