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Clojure Data Analysis Cookbook - Second Edition

You're reading from   Clojure Data Analysis Cookbook - Second Edition Dive into data analysis with Clojure through over 100 practical recipes for every stage of the analysis and collection process

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Product type Paperback
Published in Jan 2015
Publisher
ISBN-13 9781784390297
Length 372 pages
Edition 2nd Edition
Languages
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Author (1):
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Eric Richard Rochester Eric Richard Rochester
Author Profile Icon Eric Richard Rochester
Eric Richard Rochester
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Table of Contents (14) Chapters Close

Preface 1. Importing Data for Analysis FREE CHAPTER 2. Cleaning and Validating Data 3. Managing Complexity with Concurrent Programming 4. Improving Performance with Parallel Programming 5. Distributed Data Processing with Cascalog 6. Working with Incanter Datasets 7. Statistical Data Analysis with Incanter 8. Working with Mathematica and R 9. Clustering, Classifying, and Working with Weka 10. Working with Unstructured and Textual Data 11. Graphing in Incanter 12. Creating Charts for the Web Index

Plotting in R from Clojure


One of R's strengths is its plotting ability. In this recipe, we'll see how to take some data and plot it on a graph. We won't really exercise R's graphic abilities, but this should be enough to get you started.

Getting ready

We must first complete the recipe, Setting up R to talk to Clojure, and have Rserve running. We must also have the Clojure-specific parts of that recipe done and the connection to Rserve made.

We'll need the ToR protocol and the implementations that we defined in the Passing vectors into R recipe.

Also, we'll need access to the java.io.File class:

(import '[java.io File])

How to do it…

This recipe will look a lot like a number of other R-related recipes. We'll create a function that assembles the string with the R expression and then we'll see it in action.

  1. First, we'll define a function to initialize a PNG file for output, plot some data, and save the file, all from R:

    (defn r-plot
      ([data filename] (r-plot data filename *r-cxn*))
      ([data filename...
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