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Mastering Machine Learning with R

You're reading from   Mastering Machine Learning with R Advanced machine learning techniques for building smart applications with R 3.5

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Product type Paperback
Published in Jan 2019
Publisher
ISBN-13 9781789618006
Length 354 pages
Edition 3rd Edition
Languages
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Author (1):
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Cory Lesmeister Cory Lesmeister
Author Profile Icon Cory Lesmeister
Cory Lesmeister
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Table of Contents (16) Chapters Close

Preface 1. Preparing and Understanding Data 2. Linear Regression FREE CHAPTER 3. Logistic Regression 4. Advanced Feature Selection in Linear Models 5. K-Nearest Neighbors and Support Vector Machines 6. Tree-Based Classification 7. Neural Networks and Deep Learning 8. Creating Ensembles and Multiclass Methods 9. Cluster Analysis 10. Principal Component Analysis 11. Association Analysis 12. Time Series and Causality 13. Text Mining 14. Creating a Package 15. Other Books You May Enjoy

PCA modeling

For the modeling process, we will use the following steps:

  1. Extract the components and determine the number to retain
  2. Rotate the retained components
  3. Interpret the rotated solution
  4. Create scores from the non-rotated components
  5. Use the scores as input variables for regression analysis with MARS and evaluate the performance on the test data

There are many different ways and packages used to conduct PCA in R, including what seems to be the most commonly used prcomp() and princomp() functions in base R. However, for my money, it seems that the psych package is the most flexible with the best options.

Component extraction

To extract the components with the psych package, you will use the principal() function. The syntax...

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