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Machine Learning with R Cookbook, Second Edition

You're reading from   Machine Learning with R Cookbook, Second Edition Analyze data and build predictive models

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Product type Paperback
Published in Oct 2017
Publisher Packt
ISBN-13 9781787284395
Length 572 pages
Edition 2nd Edition
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Authors (2):
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Ashish Bhatia Ashish Bhatia
Author Profile Icon Ashish Bhatia
Ashish Bhatia
Yu-Wei, Chiu (David Chiu) Yu-Wei, Chiu (David Chiu)
Author Profile Icon Yu-Wei, Chiu (David Chiu)
Yu-Wei, Chiu (David Chiu)
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Table of Contents (15) Chapters Close

Preface 1. Practical Machine Learning with R FREE CHAPTER 2. Data Exploration with Air Quality Datasets 3. Analyzing Time Series Data 4. R and Statistics 5. Understanding Regression Analysis 6. Survival Analysis 7. Classification 1 - Tree, Lazy, and Probabilistic 8. Classification 2 - Neural Network and SVM 9. Model Evaluation 10. Ensemble Learning 11. Clustering 12. Association Analysis and Sequence Mining 13. Dimension Reduction 14. Big Data Analysis (R and Hadoop)

Pruning a recursive partitioning tree


In previous recipes, we built a complex decision tree for the churn dataset. However, sometimes we have to remove sections that are not powerful in classifying instances to avoid over-fitting and to improve prediction accuracy. Therefore, in this recipe, we introduce the cost complexity pruning method to prune the classification tree.

Getting ready

You need to have the previous recipe completed by generating a classification model, and to assign the model into the churn.rp variable.

How to do it...

Perform the following steps to prune the classification tree:

  1. Find the minimum cross-validation error of the classification tree model:
        > min(churn.rp$cptable[,"xerror"])
        Output    
        [1] 0.4707602  
  1. Locate the record with the minimum cross-validation errors:
        > which.min(churn.rp$cptable[,"xerror"])
        Output
        7  
  1. Get the cost complexity parameter of the record with the minimum cross-validation errors:
        > churn...
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