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How-To Tutorials - Data Science

4 Articles
article-image-mastering-transfer-learning-fine-tuning-bert-and-vision-transformers
Sinan Ozdemir
27 Nov 2024
15 min read
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Mastering Transfer Learning: Fine-Tuning BERT and Vision Transformers

Sinan Ozdemir
27 Nov 2024
15 min read
This article is an excerpt from the book, "Principles of Data Science", by Sinan Ozdemir. This book provides an end-to-end framework for cultivating critical thinking about data, performing practical data science, building performant machine learning models, and mitigating bias in AI pipelines. Learn the fundamentals of computational math and stats while exploring modern machine learning and large pre-trained models.IntroductionTransfer learning (TL) has revolutionized the field of deep learning by enabling pre-trained models to adapt their broad, generalized knowledge to specific tasks with minimal labeled data. This article delves into TL with BERT and GPT, demonstrating how to fine-tune these advanced models for text classification and image classification tasks. Through hands-on examples, we illustrate how TL leverages pre-trained architectures to simplify complex problems and achieve high accuracy with limited data.TL with BERT and GPTIn this article, we will take some models that have already learned a lot from their pre-training and fine-tune them to perform a new, related task. This process involves adjusting the model’s parameters to better suit the new task, much like fine-tuning a musical instrument:Figure 12.8 – ITLITL takes a pre-trained model that was generally trained on a semi-supervised (or unsupervised) task and then is given labeled data to learn a specific task.Examples of TLLet’s take a look at some examples of TL with specific pre-trained models.Example – Fine-tuning a pre-trained model for text classificationConsider a simple text classification problem. Suppose we need to analyze customer reviews and determine whether they’re positive or negative. We have a dataset of reviews, but it’s not nearly large enough to train a deep learning (DL) model from scratch. We will fine-tune BERT on a text classification task, allowing the model to adapt its existing knowledge to our specific problem.We will have to move away from the popular scikit-learn library to another popular library called transformers, which was created by HuggingFace (the pre-trained model repository I mentioned earlier) as scikit-learn does not (yet) support Transformer models.Figure 12.9 shows how we will have to take the original BERT model and make some minor modifications to it to perform text classification. Luckily, the transformers package has a built-in class to do this for  us called BertForSequenceClassification:Figure 12.9 – Simplest text classification caseIn many TL cases, we need to architect additional layers. In the simplest text classification case, we add a classification layer on top of a pre-trained BERT model so that it can perform the kind of classification we want.The following code block shows an end-to-end code example of fine-tuning BERT on a text classification task. Note that we are also using a package called datasets, also made by HuggingFace, to load a sentiment classification task from IMDb reviews. Let’s  begin by loading up the dataset:# Import necessary libraries from datasets import load_dataset from transformers import BertTokenizer, BertForSequenceClassification, Trainer, TrainingArguments # Load the dataset imdb_data = load_dataset('imdb', split='train[:1000]') # Loading only 1000 samples for a toy example # Define the tokenizer tokenizer = BertTokenizer.from_pretrained('bert-base-uncased') # Preprocess the data def encode(examples): return tokenizer(examples['text'], truncation=True, padding='max_ length', max_length=512) imdb_data = imdb_data.map(encode, batched=True) # Format the dataset to PyTorch tensors imdb_data.set_format(type='torch', columns=['input_ids', 'attention_ mask', 'label'])With our dataset loaded up, we can run some training code to update our BERT model on our labeled data:# Define the model model = BertForSequenceClassification.from_pretrained( 'bert-base-uncased', num_labels=2) # Define the training arguments training_args = TrainingArguments( output_dir='./results', num_train_epochs=1, per_device_train_batch_size=4 ) # Define the trainer trainer = Trainer(model=model, args=training_args, train_dataset=imdb_ data) # Train the model trainer.train() # Save the model model.save_pretrained('./my_bert_model')Once we have our saved model, we can use the following code to run the model against unseen data:from transformers import pipeline # Define the sentiment analysis pipeline nlp = pipeline('sentiment-analysis', model=model, tokenizer=tokenizer) # Use the pipeline to predict the sentiment of a new review review = "The movie was fantastic! I enjoyed every moment of it." result = nlp(review) # Print the result print(f"label: {result[0]['label']}, with score: {round(result[0] ['score'], 4)}") # "The movie was fantastic! I enjoyed every moment of it." # POSITIVE: 99%Example – TL for image classificationWe could take a pre-trained model such as ResNet or the Vision Transformer (shown in Figure 12.10), initially trained on a large-scale image dataset such as ImageNet. This model has already learned to detect various features from images, from simple shapes to complex objects. We can take advantage of this knowledge, fi ne-tuning  the model on a custom image classification task:Figure 12.10 – The Vision TransformerThe Vision Transformer is like a BERT model for images. It relies on many of the same principles, except instead of text tokens, it uses segments of images as “tokens” instead.The following code block shows an end-to-end code example of fine-tuning the Vision Transformer on an image classification task. The code should look very similar to the BERT code from the previous section because the aim of the transformers library is to standardize training and usage of modern pre-trained models so that no matter what task you are performing, they can offer a relatively unified training and inference experience.Let’s begin by loading up our data and taking a look at the kinds of images we have (seen in Figure 12.11). Note that we are only going to use 1% of the dataset to show that you really don’t need that much data to get a lot out of pre-trained models!# Import necessary libraries from datasets import load_dataset from transformers import ViTImageProcessor, ViTForImageClassification from torch.utils.data import DataLoader import matplotlib.pyplot as plt import torch from torchvision.transforms.functional import to_pil_image # Load the CIFAR10 dataset using Hugging Face datasets # Load only the first 1% of the train and test sets train_dataset = load_dataset("cifar10", split="train[:1%]") test_dataset = load_dataset("cifar10", split="test[:1%]") # Define the feature extractor feature_extractor = ViTImageProcessor.from_pretrained('google/vitbase-patch16-224') # Preprocess the data def transform(examples): # print(examples) # Convert to list of PIL Images examples['pixel_values'] = feature_ extractor(images=examples["img"], return_tensors="pt")["pixel_values"] return examples # Apply the transformations train_dataset = train_dataset.map( transform, batched=True, batch_size=32 ).with_format('pt') test_dataset = test_dataset.map( transform, batched=True, batch_size=32 ).with_format('pt')We can similarly use the model using the following code:Figure 12.11 – A single example from CIFAR10 showing an airplaneNow, we can train our pre-trained Vision Transformer:# Define the model model = ViTForImageClassification.from_pretrained( 'google/vit-base-patch16-224', num_labels=10, ignore_mismatched_sizes=True ) LABELS = ['airplane', 'automobile', 'bird', 'cat', 'deer', 'dog', 'frog', 'horse', 'ship', 'truck'] model.config.id2label = LABELS # Define a function for computing metrics def compute_metrics(p): predictions, labels = p preds = np.argmax(predictions, axis=1) return {"accuracy": accuracy_score(labels, preds)} # Define the training arguments training_args = TrainingArguments( output_dir='./results', num_train_epochs=5, per_device_train_batch_size=4, load_best_model_at_end=True, # Save and evaluate at the end of each epoch evaluation_strategy='epoch', save_strategy='epoch' ) # Define the trainer trainer = Trainer( model=model, args=training_args, train_dataset=train_dataset, eval_dataset=test_dataset )Our final model has about 95% accuracy on 1% of the test set. We can now use our new classifier on unseen images, as in this next code block:from PIL import Image from transformers import pipeline # Define an image classification pipeline classification_pipeline = pipeline( 'image-classification', model=model, feature_extractor=feature_extractor ) # Load an image image = Image.open('stock_image_plane.jpg') # Use the pipeline to classify the image result = classification_pipeline(image)Figure 12.12 shows the result of this single classification, and it looks like it did pretty well:Figure 12.12 – Our classifier predicting a stock image of a plane correctlyWith minimal labeled data, we can leverage TL to turn models off the shelf into powerhouse predictive models.ConclusionTransfer learning is a transformative technique in deep learning, empowering developers to harness the power of pre-trained models like BERT and the Vision Transformer for specialized tasks. From sentiment analysis to image classification, these models can be fine-tuned with minimal labeled data, offering impressive performance and adaptability. By using libraries like HuggingFace’s transformers, TL streamlines model training, making state-of-the-art AI accessible and versatile across domains. As demonstrated in this article, TL is not only efficient but also a practical way to achieve powerful predictive capabilities with limited resources.Author BioSinan is an active lecturer focusing on large language models and a former lecturer of data science at the Johns Hopkins University. He is the author of multiple textbooks on data science and machine learning including "Quick Start Guide to LLMs". Sinan is currently the founder of LoopGenius which uses AI to help people and businesses boost their sales and was previously the founder of the acquired Kylie.ai, an enterprise-grade conversational AI platform with RPA capabilities. He holds a Master’s Degree in Pure Mathematics from Johns Hopkins University and is based in San Francisco.
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Dylan Intorf, Kendrick van Doorn, Dylan Storey
12 Nov 2024
15 min read
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Airflow Ops Best Practices: Observation and Monitoring

Dylan Intorf, Kendrick van Doorn, Dylan Storey
12 Nov 2024
15 min read
This article is an excerpt from the book, "Apache Airflow Best Practices", by Dylan Intorf, Kendrick van Doorn, Dylan Storey. With practical approach and detailed examples, this book covers newest features of Apache Airflow 2.x and it's potential for workflow orchestration, operational best practices, and data engineering.IntroductionIn this article, we will continue to explore the application of modern “ops” practices within Apache Airflow, focusing on the observation and monitoring of your systems and DAGs after they’ve been deployed.We’ll divide this observation into two segments – the core Airflow system and individual DAGs. Each segment will cover specific metrics and measurements you should be monitoring for alerting and potential intervention.When we discuss monitoring in this section, we will consider two types of monitoring – active and suppressive.In an active monitoring scenario, a process will actively check a service’s health state, recording its state and potentially taking action directly on the return value.In a suppressive monitoring scenario, the absence of a state (or state change) is usually meaningful. In these scenarios, the monitored application sends an active schedule to a process to inform it that it is OK, usually suppressing an action (such as an alert) from occurring.This chapter covers the following topics:Monitoring core Airflow componentsMonitoring your DAGsTechnical requirementsBy now, we expect you to have a good understanding of Airflow and its core components, along with functional knowledge in the deployment and operation of Airflow and Airflow DAGs.We will not be covering specific observability aggregators or telemetry tools; instead, we will focus on the activities you should be keeping an eye on. We strongly recommend that you work closely with your ops teams to understand what tools exist in your stack and how to configure them for capture and alerting your deployments.Monitoring core Airflow componentsAll of the components we will discuss here are critical to ensuring a functioning Airflow deployment. Generally, all of them should be monitored with a bare minimum check of Is it on? and if a component is not, an alert should surface to your team for investigation. The easiest way to check this is to query the REST API on the web server at `/health/`; this will return a JSON object that can be parsed to determine whether components are healthy and, if not, when they were last seen.SchedulerThis component needs to be running and working effectively in order for tasks to be scheduled for execution.When the scheduler service is started, it also starts a `/health` endpoint that can be checked by an external process with an active monitoring approach.The returned signal does not always indicate that the scheduler is working properly, as its state is simply indicative that the service is up and running. There are many scenarios where the scheduler may be operating but unable to schedule jobs; as a result, many deployments will include a canary dag to their deployment that has a single task, acting to suppress an external alert from going off.Import metrics that airflow exposes for you include the following:scheduler.scheduler_loop_duration: This should be monitored to ensure that your scheduler is able to loop and schedule tasks for execution. As this metric increases, you will see tasks beginning to schedule more slowly, to the point where you may begin missing SLAs because tasks fail to reach a schedulable state.scheduler.tasks.starving: This indicates how many tasks cannot be scheduled because there are no slots available. Pools are a mechanism that Airflow uses to balance large numbers of submitted task executions versus a finite amount of execution throughput. It is likely that this number will not be zero, but being high for extended periods of time may point to an issue in how DAGs are being written to schedule work.scheduler.tasks.executable: This indicates how many tasks are ready for execution (i.e., queued). This number will sometimes not be zero, and that is OK, but if the number increases and stays high for extended periods of time, it indicates that you may need additional computer resources to handle the load. Look at your executor to increase the number of workers it can run. Metadata databaseThe metadata database is used to store and track all of the metadata for your Airflow deployments’ previous DAG/task executions, along with information about your environment’s roles and permissions. Losing data from this database can interrupt normal operations and cause unintended consequences, with DAG runs being repeated.While critical, because it is architecturally ubiquitous, the database is also least likely to encounter issues, and if it does, they are absolutely catastrophic in nature.We generally suggest you utilize a managed service for provisioning and operating your backing database, ensuring that a disaster recovery plan for your metadata database is in place at all times.Some active areas to monitor on your database include the following:Connection pool size/usage: Monitor both the connection pool size and usage over time to ensure appropriate configuration, and identify potential bottlenecks or resource contention arising from Airflow components’ concurrent connections.Query performance: Measure query latency to detect inefficient queries or performance issues, while monitoring query throughput to ensure effective workload handling by the database.Storage metrics: Monitor the disk space utilization of the metadata database to ensure that it has sufficient storage capacity. Set up alerts for low disk space conditions to prevent database outages due to storage constraints.Backup status: Monitor the status of database backups to ensure that they are performed regularly and successfully. Verify backup integrity and retention policies to mitigate the risk of data loss if there is a database failure.TriggererThe Triggerer instance manages all of the asynchronous operations of deferrable operators in a deferred state. As such, major operational concerns generally relate to ensuring that individual deferred operators don’t cause major blocking calls to the event loop. If this occurs, your deferrable tasks will not be able to check their state changes as frequently, and this will impact scheduling performance.Import metrics that airflow exposes for you include the following:triggers.blocked_main_thread: The number of triggers that have blocked the main thread. This is a counter and should monotonically increase over time; pay attention to large differences between recording (or quick acceleration) counts, as it’s indicative of a larger problem.triggers.running: The number of triggers currently on a triggerer instance. This metric should be monitored to determine whether you need to increase the number of triggerer instances you are running. While the official documentation claims that up to tens of thousands of triggers can be on an instance, the common operational number is much lower. Tune at your discretion, but depending on the complexity of your triggers, you may need to add a new instance for every few hundred consistent triggers you run.Executors/workersDepending on the executor you use, you will need to monitor your executors and workers a bit differently.The Kubernetes executor will utilize the Kubernetes API to schedule tasks for execution; as such, you should utilize the Kubernetes events and metrics servers to gather logs and metrics for your task instances. Common metrics to collect on an individual task are CPU and memory usage. This is crucial for tuning requests or mutating individual task resource requests to ensure that they execute safely.The Celery worker has additional components and long-lived processes that you need to metricize. You should monitor an individual Celery worker’s memory and CPU utilization to ensure that it is not over- or under-provisioned, tuning allocated resources accordingly. You also need to monitor the message broker (usually Redis or RabbitMQ) to ensure that it is appropriately sized. Finally, it is critical to measure the queue length of your message broker and ensure that too much “back pressure” isn’t being created in the system. If you find that your tasks are sitting in a queued state for a long period of time and the queue length is consistently growing, it’s a sign that you should start an additional Celery worker to execute on scheduled tasks. You should also investigate using the native Celery monitoring tool Flower (https://flower.readthedocs.io/en/latest/) for additional, more nuanced methods of monitoring.Web serverThe Airflow web server is the UI for not just your Airflow deployment but also the RESTful interface. Especially if you happen to be controlling Airflow scheduling behavior with API calls, you should keep an eye on the following metrics:Response time: Measure the time taken for the API to respond to requests. This metric indicates the overall performance of the API and can help identify potential bottlenecks.Error rate: Monitor the rate of errors returned by the API, such as 4xx and 5xx HTTP status codes. High error rates may indicate issues with the API implementation or underlying systems.Request rate: Track the rate of incoming requests to the API over time. Sudden spikes or drops in request rates can impact performance and indicate changes in usage patterns.System resource utilization: Monitor resource utilization metrics such as CPU, memory, disk I/O, and network bandwidth on the servers hosting the API. High resource utilization can indicate potential performance bottlenecks or capacity limits.Throughput: Measure the number of successful requests processed by the API per unit of time. Throughput metrics provide insights into the API’s capacity to handle incoming traffic.Now that you have some basic metrics to collect from your core architectural components and can monitor the overall health of an application, we need to monitor the actual DAGs themselves to ensure that they function as intended.Monitoring your DAGsThere are multiple aspects to monitoring your DAGs, and while they’re all valuable, they may not all be necessary. Take care to ensure that your monitoring and alerting stack match your organizational needs with regard to operational parameters for resiliency and, if there is a failure, recovery times. No matter how much or how little you choose to implement, knowing that your DAGs work and if and how they fail is the first step in fixing problems that will arise.LoggingAirflow writes logs for tasks in a hierarchical structure that allows you to see each task’s logs in the Airflow UI. The community also provides a number of providers to utilize other services for backing log storage and retrieval. A complete list of supported providers is available at https://airflow.apache.org/docs/apache-airflow-providers/core-extensions/logging.html.Airflow uses the standard Python logging framework to write logs. If you’re writing custom operators or executing Python functions with a PythonOperator, just make sure that you instantiate a Python logger instance, and then the associated methods will handle everything for you.AlertingAirflow provides mechanisms for alerting on operational aspects of your executing workloads that can be configured within your DAG:Email notifications: Email notifications can be sent if a task is put into a marked or retry state with the `email_on_failure` or `email_on_retry` state, respectively. These arguments can be provided to all tasks in the DAG with the `default_args` key work in the DAG, or individual tasks by setting the keyword argument individually.Callbacks: Callbacks are special actions that are executed if a specific state change occurs. Generally, these callbacks should be thoughtfully leveraged to send alerts that are critical operationally:on_success_callback: This callback will be executed at both the task and DAG levels when entering a successful state. Unless it is critical that you know whether something succeeds, we generally suggest not using this for alerting.on_failure_callback: This callback is invoked when a task enters a failed state. Generally, this callback should always be set and, in critical scenarios, alert on failures that require intervention and support.on_execute_callback: This is invoked right before a task executes and only exists at the task level. Use sparingly for alerting, as it can quickly become a noisy alert when overused.on_retry_callback: This is invoked when a task is placed in a retry state. This is another callback to be cautious about as an alert, as it can become noisy and cause false alarms.sla_miss_callback: This is invoked when a DAG misses its defined SLA. This callback is only executed at the end of a DAG’s execution cycle so tends to be a very reactive notification that something has gone wrong.SLA monitoringAs awesome of a tool as Airflow is, it is a well-known fact in the community that SLAs, while largely functional, have some unfortunate details with regard to implementation that can make them problematic at best, and they are generally regarded as a broken feature in Airflow. We suggest that if you require SLA monitoring on your workflows, you deploy a CRON job monitoring tool such as healthchecks (https://github.com/healthchecks/healthchecks) that allows you to create suppressive alerts for your services through its rest API to manage SLAs. By pairing this third- party service with either HTTP operators or simple requests from callbacks, you can ensure that your most critical workflows achieve dynamic and resilient SLA alerting.Performance profilingThe Airflow UI is a great tool for profiling the performance of individual DAGs:The Gannt chart view: This is a great visualization for understanding the amount of time spent on individual tasks and the relative order of execution. If you’re worried about bottlenecks in your workflow, start here.Task duration: This allows you to profile the run characteristics of tasks within your DAG over a historical period. This tool is great at helping you understand temporal patterns in execution time and finding outliers in execution. Especially if you find that a DAG slows down over time, this view can help you understand whether it is a systemic issue and which tasks might need additional development.Landing times: This shows the delta between task completion and the start of the DAG run. This is an un-intuitive but powerful metric, as increases in it, when paired with stable task durations in upstream tasks, can help identify whether a scheduler is under heavy load and may need tuning.Additional metrics that have proven to be useful (but may need to be calculated) include the following:Task startup time: This is an especially useful metric when operating with a Kubernetes executor. To calculate this, you will need to calculate the difference between `start_date` and `execution_date` on each task instance. This metric will especially help you identify bottlenecks outside of Airflow that may impact task run times.Task failure and retry counts: Monitoring the frequency of task failures and retries can help identify information about the stability and robustness of your environment. Especially if these types of failure can be linked back to patterns in time or execution, it can help debug interactions with other services.DAG parsing time: Monitoring the amount of time a DAG takes to parse is very important to understand scheduler load and bottlenecks. If an individual DAG takes a long time to load (either due to heavy imports or long blocking calls being executed during parsing), it can have a material impact on the timeliness of scheduling tasks.ConclusionIn this article, we covered some essential strategies to effectively monitor both the core Airflow system and individual DAGs post-deployment. We highlighted the importance of active and suppressive monitoring techniques and provided insights into the critical metrics to track for each component, including the scheduler, metadata database, triggerer, executors/workers, and web server. Additionally, we discussed logging, alerting mechanisms, SLA monitoring, and performance profiling techniques to ensure the reliability, scalability, and efficiency of Airflow workflows. By implementing these monitoring practices and leveraging the insights gained, operators can proactively manage and optimize their Airflow deployments for optimal performance and reliability.Author BioDylan Intorf is a solutions architect and data engineer with a BS from Arizona State University in Computer Science. He has 10+ years of experience in the software and data engineering space, delivering custom tailored solutions to Tech, Financial, and Insurance industries.Kendrick van Doorn is an engineering and business leader with a background in software development, with over 10 years of developing tech and data strategies at Fortune 100 companies. In his spare time, he enjoys taking classes at different universities and is currently an MBA candidate at Columbia University.Dylan Storey has a B.Sc. and M.Sc. from California State University, Fresno in Biology and a Ph.D. from University of Tennessee, Knoxville in Life Sciences where he leveraged computational methods to study a variety of biological systems. He has over 15 years of experience in building, growing, and leading teams; solving problems in developing and operating data products at a variety of scales and industries.
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Jasmeet Bhatia, Kartik Chaudhary
04 Nov 2024
15 min read
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Vertex AI Workbench: Your Complete Guide to Scaling Machine Learning with Google Cloud

Jasmeet Bhatia, Kartik Chaudhary
04 Nov 2024
15 min read
This article is an excerpt from the book, "The Definitive Guide to Google Vertex AI", by Jasmeet Bhatia, Kartik Chaudhary. The Definitive Guide to Google Vertex AI is for ML practitioners who want to learn Google best practices, MLOps tooling, and turnkey AI solutions for solving large-scale real-world AI/ML problems. This book takes a hands-on approach to help you become an ML rockstar on Google Cloud Platform in no time.Introduction While working on an ML project, if we are running a Jupyter Notebook in a local environment, or using a web-based Colab- or Kaggle-like kernel, we can perform some quick experiments and get some initial accuracy or results from ML algorithms very fast. But we hit a wall when it comes to performing large-scale experiments, launching long-running jobs, hosting a model, and also in the case of model monitoring. Additionally, if the data related to a project requires some more granular permissions on security and privacy (fine-grained control over who can view/access the data), it’s not feasible in local or Colab-like environments. All these challenges can be solved just by moving to the cloud. Vertex AI Workbench within Google Cloud is a JupyterLab-based environment that can be leveraged for all kinds of development needs of a typical data science project. The JupyterLab environment is very similar to the Jupyter Notebook environment, and thus we will be using these terms interchangeably throughout the book. Vertex AI Workbench has options for creating managed notebook instances as well as user-managed notebook instances. User-managed notebook instances give more control to the user, while managed notebooks come with some key extra features. We will discuss more about these later in this section. Some key features of the Vertex AI Workbench notebook suite include the following: Fully managed–Vertex AI Workbench provides a Jupyter Notebook-based fully managed environment that provides enterprise-level scale without managing infrastructure, security, and user-management capabilities. Interactive experience–Data exploration and model experiments are easier as managed notebooks can easily interact with other Google Cloud services such as storage systems, big data solutions, and so on. Prototype to production AI–Vertex AI notebooks can easily interact with other Vertex AI tools and Google Cloud services and thus provide an environment to run end-to-end ML projects from development to deployment with minimal transition. Multi-kernel support–Workbench provides multi-kernel support in a single managed notebook instance including kernels for tools such as TensorFlow, PyTorch, Spark, and R. Each of these kernels comes with pre-installed useful ML libraries and lets us install additional libraries as required. Scheduling notebooks–Vertex AI Workbench lets us schedule notebook runs on an ad hoc and recurring basis. This functionality is quite useful in setting up and running large-scale experiments quickly. This feature is available through managed notebook instances. More information will be provided on this in the coming sections. With this background, we can now start working with Jupyter Notebooks on Vertex AI Workbench. The next section provides basic guidelines for getting started with notebooks on Vertex AI. Getting started with Vertex AI Workbench Go to the Google Cloud console and open Vertex AI from the products menu on the left pane or by using the search bar on the top. Inside Vertex AI, click on Workbench, and it will open a page very similar to the one shown in Figure 4.3. More information on this is available in the official  documentation (https://cloud.google.com/vertex-ai/docs/workbench/ introduction).  Figure 4.3 – Vertex AI Workbench UI within the Google Cloud console As we can see, Vertex AI Workbench is basically Jupyter Notebook as a service with the flexibility of working with managed as well as user-managed notebooks. User-managed notebooks are suitable for use cases where we need a more customized environment with relatively higher control. Another good thing about user-managed notebooks is that we can choose a suitable Docker container based on our development needs; these notebooks also let us change the type/size of the instance later on with a restart. To choose the best Jupyter Notebook option for a particular project, it’s important to know about the common differences between the two solutions. Table 4.1 describes some common differences between fully managed and user-managed notebooks: Table 4.1 – Differences between managed and user-managed notebook instances Let’s create one user-managed notebook to check the available options:  Figure 4.4 – Jupyter Notebook kernel configurations As we can see in the preceding screenshot, user-managed notebook instances come with several customized image options to choose from. Along with the support of tools such as TensorFlow Enterprise, PyTorch, JAX, and so on, it also lets us decide whether we want to work with GPUs (which can be changed later, of course, as per needs). These customized images come with all useful libraries pre-installed for the desired framework, plus provide the flexibility to install any third-party packages within the instance. After choosing the appropriate image, we get more options to customize things such as notebook name, notebook region, operating system, environment, machine types, accelerators, and so on (see the following screenshot):  Figure 4.5 – Configuring a new user-managed Jupyter Notebook Once we click on the CREATE button, it can take a couple of minutes to create a notebook instance. Once it is ready, we can launch the Jupyter instance in a browser tab using the link provided inside Workbench (see Figure 4.6). We also get the option to stop the notebook for some time when we are not using it (to reduce cost):  Figure 4.6 – A running Jupyter Notebook instance This Jupyter instance can be accessed by all team members having access to Workbench, which helps in collaborating and sharing progress with other teammates. Once we click on OPEN JUPYTERLAB, it opens a familiar Jupyter environment in a new tab (see Figure 4.7):  Figure 4.7 – A user-managed JupyterLab instance in Vertex AI Workbench A Google-managed JupyterLab instance also looks very similar (see Figure 4.8):  Figure 4.8 – A Google-managed JupyterLab instance in Vertex AI Workbench Now that we can access the notebook instance in the browser, we can launch a new Jupyter Notebook or terminal and get started on the project. After providing sufficient permissions to the service account, many useful Google Cloud services such as BigQuery, GCS, Dataflow, and so on can be accessed from the Jupyter Notebook itself using SDKs. This makes Vertex AI Workbench a one-stop tool for every ML development need. Note: We should stop Vertex AI Workbench instances when we are not using them or don’t plan to use them for a long period of time. This will help prevent us from incurring costs from running them unnecessarily for a long period of time. In the next sections, we will learn how to create notebooks using custom containers and how to schedule notebooks with Vertex AI Workbench. Custom containers for Vertex AI Workbench Vertex AI Workbench gives us the flexibility of creating notebook instances based on a custom container as well. The main advantage of a custom container-based notebook is that it lets us customize the notebook environment based on our specific needs. Suppose we want to work with a new TensorFlow version (or any other library) that is currently not available as a predefined kernel. We can create a custom Docker container with the required version and launch a Workbench instance using this container. Custom containers are supported by both managed and user-managed notebooks. Here is how to launch a user-managed notebook instance using a custom container: 1. The first step is to create a custom container based on the requirements. Most of the time, a derivative container (a container based on an existing DL container image) would be easy to set up. See the following example Dockerfile; here, we are first pulling an existing TensorFlow GPU image and then installing a new TensorFlow version from the source: FROM gcr.io/deeplearning-platform-release/tf-gpu:latest RUN pip install -y tensorflow2. Next, build and push the container image to Container Registry, such that it should be accessible to the Google Compute Engine (GCE) service account. See the following source to build and push the container image: export PROJECT=$(gcloud config list project --format "value(core.project)") docker build . -f Dockerfile.example -t "gcr.io/${PROJECT}/ tf-custom:latest" docker push "gcr.io/${PROJECT}/tf-custom:latest"Note that the service account should be provided with sufficient permissions to build and push the image to the container registry, and the respective APIs should be enabled. 3. Go to the User-managed notebooks page, click on the New Notebook button, and then select Customize. Provide a notebook name and select an appropriate Region and Zone value. 4. In the Environment field, select Custom Container. 5. In the Docker Container Image field, enter the address of the custom image; in our case, it would look like this: gcr.io/${PROJECT}/tf-custom:latest 6. Make the remaining appropriate selections and click the Create button. We are all set now. While launching the notebook, we can select the custom container as a kernel and start working on the custom environment. Conclusion Vertex AI Workbench stands out as a powerful, cloud-based environment that streamlines machine learning development and deployment. By leveraging its managed and user-managed notebook options, teams can overcome local development limitations, ensuring better scalability, enhanced security, and integrated access to Google Cloud services. This guide has explored the foundational aspects of working with Vertex AI Workbench, including its customizable environments, scheduling features, and the use of custom containers. With Vertex AI Workbench, data scientists and ML practitioners can focus on innovation and productivity, confidently handling projects from inception to production. Author BioJasmeet Bhatia is a machine learning solution architect with over 18 years of industry experience, with the last 10 years focused on global-scale data analytics and machine learning solutions. In his current role at Google, he works closely with key GCP enterprise customers to provide them guidance on how to best use Google's cutting-edge machine learning products. At Google, he has also worked as part of the Area 120 incubator on building innovative data products such as Demand Signals, and he has been involved in the launch of Google products such as Time Series Insights. Before Google, he worked in similar roles at Microsoft and Deloitte.When not immersed in technology, he loves spending time with his wife and two daughters, reading books, watching movies, and exploring the scenic trails of southern California.He holds a bachelor's degree in electronics engineering from Jamia Millia Islamia University in India and an MBA from the University of California Los Angeles (UCLA) Anderson School of Management.Kartik Chaudhary is an AI enthusiast, educator, and ML professional with 6+ years of industry experience. He currently works as a senior AI engineer with Google to design and architect ML solutions for Google's strategic customers, leveraging core Google products, frameworks, and AI tools. He previously worked with UHG, as a data scientist, and helped in making the healthcare system work better for everyone. Kartik has filed nine patents at the intersection of AI and healthcare.Kartik loves sharing knowledge and runs his own blog on AI, titled Drops of AI.Away from work, he loves watching anime and movies and capturing the beauty of sunsets.
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Kedeisha Bryan, Taamir Ransome
31 Oct 2024
10 min read
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Essential SQL for Data Engineers

Kedeisha Bryan, Taamir Ransome
31 Oct 2024
10 min read
This article is an excerpt from the book, Cracking the Data Engineering Interview, by Kedeisha Bryan, Taamir Ransome. The book is a practical guide that’ll help you prepare to successfully break into the data engineering role. The chapters cover technical concepts as well as tips for resume, portfolio, and brand building to catch the employer's attention, while also focusing on case studies and real-world interview questions.Introduction In the world of data engineering, SQL is the unsung hero that empowers us to store, manipulate, transform, and migrate data easily. It is the language that enables data engineers to communicate with databases, extract valuable insights, and shape data to meet their needs. Regardless of the nature of the organization or the data infrastructure in use, a data engineer will invariably need to use SQL for creating, querying, updating, and managing databases. As such, proficiency in SQL can often the difference between a good data engineer and a great one. Whether you are new to SQL or looking to brush up your skills, this chapter will serve as a comprehensive guide. By the end of this chapter, you will have a solid understanding of SQL as a data engineer and be prepared to showcase your knowledge and skills in an interview setting. In this article, we will cover the following topics: Must-know foundational SQL concepts Must-know advanced SQL concepts Technical interview questions Must-know foundational SQL concepts In this section, we will delve into the foundational SQL concepts that form the building blocks of data engineering. Mastering these fundamental concepts is crucial for acing SQL-related interviews and effectively working with databases. Let’s explore the critical foundational SQL concepts every data engineer should be comfortable with, as follows: SQL syntax: SQL syntax is the set of rules governing how SQL statements should be written. As a data engineer, understanding SQL syntax is fundamental because you’ll be writing and reviewing SQL queries regularly. These queries enable you to extract, manipulate, and analyze data stored in relational databases. SQL order of operations: The order of operations dictates the sequence in which each of the following operators is executed in a query: FROM and JOIN WHERE GROUP BY HAVING SELECT DISTINCT ORDER BY LIMIT/OFFSET Data types: SQL supports a variety of data types, such as INT, VARCHAR, DATE, and so on. Understanding these types is crucial because they determine the kind of data that can be stored in a column, impacting storage considerations, query performance, and data integrity. As a data engineer, you might also need to convert data types or handle mismatches. SQL operators: SQL operators are used to perform operations on data. They include arithmetic operators (+, -, *, /), comparison operators (>, <, =, and so on), and logical operators (AND, OR, and NOT). Knowing these operators helps you construct complex queries to solve intricate data-related problems. Data Manipulation Language (DML), Data Definition Language (DDL), and Data Control  Language (DCL) commands: DML commands such as SELECT, INSERT, UPDATE, and DELETE allow you to manipulate data stored in the database. DDL commands such as CREATE, ALTER, and DROP enable you to manage database schemas. DCL commands such as GRANT and REVOKE are used for managing permissions. As a data engineer, you will frequently use these commands to interact with databases. Basic queries: Writing queries to select, filter, sort, and join data is an essential skill for any data engineer. These operations form the basis of data extraction and manipulation. Aggregation functions: Functions such as COUNT, SUM, AVG, MAX, MIN, and GROUP BY are used to perform calculations on multiple rows of data. They are essential for generating reports and deriving statistical insights, which are critical aspects of a data engineer’s role. The following section will dive deeper into must-know advanced SQL concepts, exploring advanced techniques to elevate your SQL proficiency. Get ready to level up your SQL game and unlock new possibilities in data engineering! Must-know advanced SQL concepts This section will explore advanced SQL concepts that will elevate your data engineering skills to the next level. These concepts will empower you to tackle complex data analysis, perform advanced data transformations, and optimize your SQL queries. Let’s delve into must-know advanced SQL concepts, as follows: Window functions: These do a calculation on a group of rows that are related to the current row. They are needed for more complex analyses, such as figuring out running totals or moving averages, which are common tasks in data engineering. Subqueries: Queries nested within other queries. They provide a powerful way to perform complex data extraction, transformation, and analysis, often making your code more efficient and readable. Common Table Expressions (CTEs): CTEs can simplify complex queries and make your code more maintainable. They are also essential for recursive queries, which are sometimes necessary for problems involving hierarchical data. Stored procedures and triggers: Stored procedures help encapsulate frequently performed tasks, improving efficiency and maintainability. Triggers can automate certain operations, improving data integrity. Both are important tools in a data engineer’s toolkit. Indexes and optimization: Indexes speed up query performance by enabling the database to locate data more quickly. Understanding how and when to use indexes is key for a data engineer, as it affects the efficiency and speed of data retrieval. Views: Views simplify access to data by encapsulating complex queries. They can also enhance security by restricting access to certain columns. As a data engineer, you’ll create and manage views to facilitate data access and manipulation. By mastering these advanced SQL concepts, you will have the tools and knowledge to handle complex data scenarios, optimize your SQL queries, and derive meaningful insights from your datasets. The following section will prepare you for technical interview questions on SQL. We will equip you with example answers and strategies to excel in SQL-related interview discussions. Let’s further enhance your SQL expertise and be well prepared for the next phase of your data engineering journey. Technical interview questions This section will address technical interview questions specifically focused on SQL for data engineers. These questions will help you demonstrate your SQL proficiency and problem-solving abilities. Let’s explore a combination of primary and advanced SQL interview questions and the best methods to approach and answer them, as follows: Question 1: What is the difference between the WHERE and HAVING clauses? Answer: The WHERE clause filters data based on conditions applied to individual rows, while the HAVING clause filters data based on grouped results. Use WHERE for filtering before aggregating data and HAVING for filtering after aggregating data. Question 2: How do you eliminate duplicate records from a result set? Answer: Use the DISTINCT keyword in the SELECT statement to eliminate duplicate records and retrieve unique values from a column or combination of columns. Question 3: What are primary keys and foreign keys in SQL? Answer: A primary key uniquely identifies each record in a table and ensures data integrity. A foreign key establishes a link between two tables, referencing the primary key of another table to enforce referential integrity and maintain relationships. Question 4: How can you sort data in SQL? Answer: Use the ORDER BY clause in a SELECT statement to sort data based on one or more columns. The ASC (ascending) keyword sorts data in ascending order, while the DESC (descending) keyword sorts it in descending order. Question 5: Explain the difference between UNION and UNION ALL in SQL. Answer: UNION combines and removes duplicate records from the result set, while UNION ALL combines all records without eliminating duplicates. UNION ALL is faster than UNION because it does not involve the duplicate elimination process. Question 6: Can you explain what a self join is in SQL? Answer: A self join is a regular join where a table is joined to itself. This is often useful when the data is related within the same table. To perform a self join, we have to use table aliases to help SQL distinguish the left from the right table. Question 7: How do you optimize a slow-performing SQL query? Answer: Analyze the query execution plan, identify bottlenecks, and consider strategies such as creating appropriate indexes, rewriting the query, or using query optimization techniques such as JOIN order optimization or subquery optimization.  Question 8: What are CTEs, and how do you use them? Answer: CTEs are temporarily named result sets that can be referenced within a query. They enhance query readability, simplify complex queries, and enable recursive queries. Use the WITH keyword to define CTEs in SQL. Question 9: Explain the ACID properties in the context of SQL databases. Answer: ACID is an acronym that stands for Atomicity, Consistency, Isolation, and Durability. These are basic properties that make sure database operations are reliable and transactional. Atomicity makes sure that a transaction is handled as a single unit, whether it is fully done or not. Consistency makes sure that a transaction moves the database from one valid state to another. Isolation makes sure that transactions that are happening at the same time don’t mess with each other. Durability makes sure that once a transaction is committed, its changes are permanent and can survive system failures. Question 10: How can you handle NULL values in SQL? Answer: Use the IS NULL or IS NOT NULL operator to check for NULL values. Additionally, you can use the COALESCE function to replace NULL values with alternative non-null values. Question 11: What is the purpose of stored procedures and functions in SQL? Answer: Stored procedures and functions are reusable pieces of SQL code encapsulating a set of SQL statements. They promote code modularity, improve performance, enhance security, and simplify database maintenance. Question 12: Explain the difference between a clustered and a non-clustered index. Answer: The physical order of the data in a table is set by a clustered index. This means that a table can only have one clustered index. The data rows of a table are stored in the leaf nodes of a clustered index. A non-clustered index, on the other hand, doesn’t change the order of the data in the table. After sorting the pointers, it keeps a separate object in a table that points back to the original table rows. There can be more than one non-clustered index for a table. Prepare for these interview questions by understanding the underlying concepts, practicing SQL queries, and being able to explain your answers. ConclusionThis article explored the foundational and advanced principles of SQL that empower data engineers to store, manipulate, transform, and migrate data confidently. Understanding these concepts has unlocked the door to seamless data operations, optimized query performance, and insightful data analysis. SQL is the language that bridges the gap between raw data and valuable insights. With a solid grasp of SQL, you possess the skills to navigate databases, write powerful queries, and design efficient data models. Whether preparing for interviews or tackling real-world data engineering challenges, the knowledge you have gained in this chapter will propel you toward success. Remember to continue exploring and honing your SQL skills. Stay updated with emerging SQL technologies, best practices, and optimization techniques to stay at the forefront of the ever-evolving data engineering landscape. Embrace the power of SQL as a critical tool in your data engineering arsenal, and let it empower you to unlock the full potential of your data. Author BioKedeisha Bryan is a data professional with experience in data analytics, science, and engineering. She has prior experience combining both Six Sigma and analytics to provide data solutions that have impacted policy changes and leadership decisions. She is fluent in tools such as SQL, Python, and Tableau.She is the founder and leader at the Data in Motion Academy, providing personalized skill development, resources, and training at scale to aspiring data professionals across the globe. Her other works include another Packt book in the works and an SQL course for LinkedIn Learning.Taamir Ransome is a Data Scientist and Software Engineer. He has experience in building machine learning and artificial intelligence solutions for the US Army. He is also the founder of the Vet Dev Institute, where he currently provides cloud-based data solutions for clients. He holds a master's degree in Analytics from Western Governors University.
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