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Bayesian Analysis with Python

You're reading from   Bayesian Analysis with Python Introduction to statistical modeling and probabilistic programming using PyMC3 and ArviZ

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Product type Paperback
Published in Dec 2018
Publisher Packt
ISBN-13 9781789341652
Length 356 pages
Edition 2nd Edition
Languages
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Author (1):
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Osvaldo Martin Osvaldo Martin
Author Profile Icon Osvaldo Martin
Osvaldo Martin
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Table of Contents (11) Chapters Close

Preface 1. Thinking Probabilistically FREE CHAPTER 2. Programming Probabilistically 3. Modeling with Linear Regression 4. Generalizing Linear Models 5. Model Comparison 6. Mixture Models 7. Gaussian Processes 8. Inference Engines 9. Where To Go Next?
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Gaussian process regression

Let's assume we can model a value as a function of plus some noise:

Here

This is similar to the assumption that we made in Chapter 3, Modeling with Linear Regression, for linear regression models. The main difference is that now we will put a prior distribution over . Gaussian processes can work as such a prior, thus we can write:

Here, represents a Gaussian process distribution, with being the mean function and the kernel, or covariance, function. Here, we have used the word function to indicate that, mathematically, the mean and covariance are infinite objects, even when, in practice, we always work with finite objects.

If the prior distribution is a GP and the likelihood is a normal distribution, then the posterior is also a GP and we can compute it analytically:


Here:

is the observed data point and represents the test points...

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