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Clojure for Data Science

You're reading from   Clojure for Data Science Statistics, big data, and machine learning for Clojure programmers

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Product type Paperback
Published in Sep 2015
Publisher
ISBN-13 9781784397180
Length 608 pages
Edition 1st Edition
Languages
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Author (1):
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Henry Garner Henry Garner
Author Profile Icon Henry Garner
Henry Garner
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Table of Contents (12) Chapters Close

Preface 1. Statistics FREE CHAPTER 2. Inference 3. Correlation 4. Classification 5. Big Data 6. Clustering 7. Recommender Systems 8. Network Analysis 9. Time Series 10. Visualization Index

Multiple R-squared


While calculating R2 previously, we saw how it was the amount of variance explained by the model:

Since the variance is the mean squared error, we can multiply both the var(ε) and var(y) terms by the sample size and arrive at the following alternative equation for R2:

This is simply the sum of squared residuals over the sum of squared differences from the mean. Incanter contains the incanter.core/sum-of-squares function that makes this very simple to express:

(defn r-squared [coefs x y]
   (let [fitted      (i/mmult x coefs)
         residuals   (i/minus y fitted)
         differences (i/minus y (s/mean y))
         rss         (i/sum-of-squares residuals)
         ess         (i/sum-of-squares differences)]
     (- 1 (/ rss ess))))

We use the variable names rss for residual sum of squares and ess for explained sum of squares. We can calculate the matrix R2 for our new model as follows:

(defn ex-3-21 []
  (let [data (swimmer-data)
        x (->> (feature-matrix ["Height...
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